STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEGS2Delta 4-desaturase, sphingolipid 2. (299 aa)    
Predicted Functional Partners:
ACER3
Alkaline ceramidase 3.
   
 
 0.945
SGMS1
Sphingomyelin synthase 1.
   
 
 0.942
CERS4
Ceramide synthase 4.
   
 0.938
ENSNVIP00000025775
annotation not available
   
 0.938
GALC
Galactosylceramidase.
     
 0.937
SMPD1
Sphingomyelin phosphodiesterase 1.
     
 0.934
CERS5
Ceramide synthase 5.
   
 0.929
ENSNVIP00000010216
Sterile alpha motif domain containing 8.
   
 
 0.929
KDSR
3-ketodihydrosphingosine reductase.
   
 
 0.929
UGCG
UDP-glucose ceramide glucosyltransferase.
   
 
 0.925
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.