Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTMR12Myotubularin related protein 12. (719 aa)    
Predicted Functional Partners:
MTMR2
Myotubularin related protein 2.
   
 0.983
MTM1
Myotubularin 1.
   
 0.964
MTMR1
Myotubularin related protein 1.
   
 0.893
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
   0.635
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
   0.630
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
   0.629
ENSNVIP00000005250
Proline rich 16.
      
 0.555
MYO7B
Myosin VIIB.
   
 
 0.533
ENSNVIP00000007336
SH3 domain binding protein 4.
      
 0.490
ENSNVIP00000001148
annotation not available
      
 0.488
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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