Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCP11L1T-complex 11 like 1. (509 aa)    
Predicted Functional Partners:
ENSNVIP00000019551
Tetratricopeptide repeat domain 5.
    
   0.872
TUBB6
Tubulin beta 6 class V.
    
 
 0.661
QSER1
Glutamine and serine rich 1.
      
 0.529
CCDC73
Coiled-coil domain containing 73.
      
 0.499
PRRG4
Proline rich and Gla domain 4.
      
 0.498
CSTF3
Cleavage stimulation factor subunit 3.
      
 0.492
DEPDC7
DEP domain containing 7.
      
 0.488
AXIN1
Axin 1.
      
 0.488
CCDC47
Coiled-coil domain containing 47.
      
 0.451
GFER
Growth factor, augmenter of liver regeneration.
      
 0.447
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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