ENSNVIP00000005550 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNVIP00000005550

AFG1 like ATPase. (480 aa)

Predicted Functional Partners:

GUCD1

0.625

MRPS9

0.615

ENSNVIP00000027054

0.615

GSTT4

0.608

ENSNVIP00000027013

0.553

DMGDH

0.552

PLAAT5

0.552

ENSNVIP00000025615

0.545

ENSNVIP00000001475

0.536

SUSD2

0.507

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DMGDH	ENSNVIP00000005550	ENSNVIP00000002997	ENSNVIP00000005550	Dimethylglycine dehydrogenase.	AFG1 like ATPase.	0.552
DMGDH	ENSNVIP00000027013	ENSNVIP00000002997	ENSNVIP00000027013	Dimethylglycine dehydrogenase.	annotation not available	0.547
DMGDH	ENSNVIP00000027054	ENSNVIP00000002997	ENSNVIP00000027054	Dimethylglycine dehydrogenase.	Beta-ureidopropionase 1.	0.613
DMGDH	GSTT4	ENSNVIP00000002997	ENSNVIP00000027625	Dimethylglycine dehydrogenase.	Glutathione S-transferase theta 4.	0.425
DMGDH	GUCD1	ENSNVIP00000002997	ENSNVIP00000027097	Dimethylglycine dehydrogenase.	Guanylyl cyclase domain containing 1.	0.551
ENSNVIP00000001475	ENSNVIP00000005550	ENSNVIP00000001475	ENSNVIP00000005550	annotation not available	AFG1 like ATPase.	0.536
ENSNVIP00000001475	ENSNVIP00000025615	ENSNVIP00000001475	ENSNVIP00000025615	annotation not available	annotation not available	0.539
ENSNVIP00000005550	DMGDH	ENSNVIP00000005550	ENSNVIP00000002997	AFG1 like ATPase.	Dimethylglycine dehydrogenase.	0.552
ENSNVIP00000005550	ENSNVIP00000001475	ENSNVIP00000005550	ENSNVIP00000001475	AFG1 like ATPase.	annotation not available	0.536
ENSNVIP00000005550	ENSNVIP00000025615	ENSNVIP00000005550	ENSNVIP00000025615	AFG1 like ATPase.	annotation not available	0.545
ENSNVIP00000005550	ENSNVIP00000027013	ENSNVIP00000005550	ENSNVIP00000027013	AFG1 like ATPase.	annotation not available	0.553
ENSNVIP00000005550	ENSNVIP00000027054	ENSNVIP00000005550	ENSNVIP00000027054	AFG1 like ATPase.	Beta-ureidopropionase 1.	0.615
ENSNVIP00000005550	GSTT4	ENSNVIP00000005550	ENSNVIP00000027625	AFG1 like ATPase.	Glutathione S-transferase theta 4.	0.608
ENSNVIP00000005550	GUCD1	ENSNVIP00000005550	ENSNVIP00000027097	AFG1 like ATPase.	Guanylyl cyclase domain containing 1.	0.625
ENSNVIP00000005550	MRPS9	ENSNVIP00000005550	ENSNVIP00000017959	AFG1 like ATPase.	Mitochondrial ribosomal protein S9.	0.615
ENSNVIP00000005550	PLAAT5	ENSNVIP00000005550	ENSNVIP00000025080	AFG1 like ATPase.	Phospholipase A and acyltransferase 5.	0.552
ENSNVIP00000005550	SUSD2	ENSNVIP00000005550	ENSNVIP00000027257	AFG1 like ATPase.	Sushi domain containing 2.	0.507
ENSNVIP00000025615	ENSNVIP00000001475	ENSNVIP00000025615	ENSNVIP00000001475	annotation not available	annotation not available	0.539
ENSNVIP00000025615	ENSNVIP00000005550	ENSNVIP00000025615	ENSNVIP00000005550	annotation not available	AFG1 like ATPase.	0.545
ENSNVIP00000027013	DMGDH	ENSNVIP00000027013	ENSNVIP00000002997	annotation not available	Dimethylglycine dehydrogenase.	0.547