STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEPDC7DEP domain containing 7. (511 aa)    
Predicted Functional Partners:
ATP8B4
ATPase phospholipid transporting 8B4 (putative).
      
 0.727
FLRT3
Fibronectin leucine rich transmembrane protein 3.
      
 0.647
ENSNVIP00000026193
RAS like family 10 member B.
      
 0.614
FAM135B
Family with sequence similarity 135 member B.
      
 0.610
RASL11B
RAS like family 11 member B.
      
 0.568
ENSNVIP00000018412
SPT16 homolog, facilitates chromatin remodeling subunit.
      
 0.550
TMEM47
Transmembrane protein 47.
      
 0.549
CSTF3
Cleavage stimulation factor subunit 3.
      
 0.541
SRRM2
Serine/arginine repetitive matrix 2.
      
 0.540
SLC5A2
Solute carrier family 5 member 2.
      
 0.540
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.