Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GRIK1Glutamate ionotropic receptor kainate type subunit 1. (949 aa)    
Predicted Functional Partners:
DLG4
Discs large MAGUK scaffold protein 4.
   
 0.909
GRIK5
Glutamate ionotropic receptor kainate type subunit 5.
   
 0.908
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
     
  0.884
GRIK4
Glutamate ionotropic receptor kainate type subunit 4.
   
 0.848
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
   
 0.674
DLG3
Discs large MAGUK scaffold protein 3.
    
 0.657
GABRA1
Gamma-aminobutyric acid type A receptor alpha1 subunit.
   
  
 0.653
PICK1
Protein interacting with PRKCA 1.
   
 0.625
NR2E3
Nuclear receptor subfamily 2 group E member 3.
   
  
 0.607
POU4F2
POU class 4 homeobox 2.
      
 0.602
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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