Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MBD3methyl-CpG binding domain protein 3. (235 aa)    
Predicted Functional Partners:
MTA2
Metastasis associated 1 family member 2.
   
 0.959
MTA1
Metastasis associated 1.
   
 0.932
MTA3
Metastasis associated 1 family member 3.
   
 0.920
ENSNVIP00000032025
annotation not available
    
 0.918
GATAD2B
GATA zinc finger domain containing 2B.
   
 0.917
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.917
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.893
CHD3
Chromodomain helicase DNA binding protein 3.
    
 0.884
CHD5
Chromodomain helicase DNA binding protein 5.
    
 0.860
CDK2AP2
Cyclin dependent kinase 2 associated protein 2.
   
 0.818
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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