STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD3Chromodomain helicase DNA binding protein 3. (2059 aa)    
Predicted Functional Partners:
ENSNVIP00000032025
annotation not available
  
0.998
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.994
CHD5
Chromodomain helicase DNA binding protein 5.
  
 
0.993
GATAD2B
GATA zinc finger domain containing 2B.
   
 0.990
MTA1
Metastasis associated 1.
   
 0.989
MTA2
Metastasis associated 1 family member 2.
   
 0.987
MTA3
Metastasis associated 1 family member 3.
   
 0.978
ENSNVIP00000027298
annotation not available
    
 0.956
ZNF219
Zinc finger protein 219.
   
 0.944
KDM1A
Lysine demethylase 1A.
   
 0.941
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.