Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H15Zinc finger CCCH-type containing 15. (425 aa)    
Predicted Functional Partners:
DRG1
Developmentally regulated GTP binding protein 1.
   
 0.999
DNAJC2
DnaJ heat shock protein family (Hsp40) member C2.
   
 
 0.939
ENSNVIP00000032261
Developmentally regulated GTP binding protein 2.
   
 0.922
SSB
Small RNA binding exonuclease protection factor La.
   
    0.846
THOC3
THO complex 3.
    
 
 0.826
JMJD7
Jumonji domain containing 7.
   
 
 0.800
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
    0.748
ENSNVIP00000008414
annotation not available
   
    0.740
RWDD1
RWD domain containing 1.
   
 
 0.726
UTP3
UTP3 small subunit processome component.
   
    0.723
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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