Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C12orf4Chromosome 12 open reading frame 4. (552 aa)    
Predicted Functional Partners:
ENSNVIP00000029678
Protein phosphatase 1 regulatory subunit 21.
    
 
 0.961
ENSNVIP00000007879
TBC1 domain containing kinase.
    
 
 0.944
CRYZL1
Crystallin zeta like 1.
   
   0.866
ENSNVIP00000023375
annotation not available
    
   0.855
ENSNVIP00000001618
annotation not available
   
    0.761
EXOC8
Exocyst complex component 8.
   
    0.759
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
    
   0.747
TBC1D31
TBC1 domain family member 31.
    
 
 0.660
ENSNVIP00000007246
annotation not available
    
 
 0.660
GIMD1
GIMAP family P-loop NTPase domain containing 1.
    
 
 0.660
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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