STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRIT1Leucine rich repeat, Ig-like and transmembrane domains 1. (621 aa)    
Predicted Functional Partners:
LRIT2
Leucine rich repeat, Ig-like and transmembrane domains 2.
   
 0.820
FRMPD2
FERM and PDZ domain containing 2.
    
 0.769
FRMPD1
FERM and PDZ domain containing 1.
      
 0.753
WDR90
WD repeat domain 90.
    
  0.748
NTNG1
Netrin G1.
    
 0.730
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.705
TONSL
Tonsoku like, DNA repair protein.
    
 0.694
ENSNVIP00000029353
annotation not available
    
 0.688
ENSNVIP00000029571
TNF receptor associated factor 7.
    
 0.688
HGFAC
HGF activator.
    
 0.665
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.