Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATP2A1ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1. (1000 aa)    
Predicted Functional Partners:
ATP2A3
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3.
   
  0.995
PLN
Phospholamban.
   
 0.990
TNNI2
Troponin I2, fast skeletal type.
   
 0.985
ATP2A2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2.
    
  0.978
SLN
Sarcolipin.
   
 0.965
TNNC2
Troponin C2, fast skeletal type.
   
 0.952
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.941
ENSNVIP00000014042
annotation not available
     
 0.916
HRC
Histidine rich calcium binding protein.
   
 0.914
PPP3CB
Protein phosphatase 3 catalytic subunit beta.
   
 0.912
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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