Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC1Trafficking protein particle complex 1. (145 aa)    
Predicted Functional Partners:
ENSNVIP00000008929
annotation not available
    
 0.998
TRAPPC2L
Trafficking protein particle complex 2 like.
   
 0.998
TRAPPC4
Trafficking protein particle complex 4.
   
0.997
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.997
ENSNVIP00000010262
Trafficking protein particle complex 6A.
   
 0.997
TRAPPC12
Trafficking protein particle complex 12.
    
 0.997
TRAPPC8
Trafficking protein particle complex 8.
    
 0.997
TRAPPC11
Trafficking protein particle complex 11.
    
 0.995
ENSNVIP00000001513
annotation not available
    
 0.986
TRAPPC13
Trafficking protein particle complex 13.
    
 0.986
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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