STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD11Sterile alpha motif domain containing 11. (598 aa)    
Predicted Functional Partners:
ZNF408
Zinc finger protein 408.
    
 
 0.697
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
  
 0.652
FAM83C
Family with sequence similarity 83 member C.
      
 0.641
PGBD5
piggyBac transposable element derived 5.
    
 
 0.616
ENSNVIP00000005594
annotation not available
      
 0.615
ENSNVIP00000013370
Ring finger protein 141.
      
 0.604
D2HGDH
D-2-hydroxyglutarate dehydrogenase.
    
 
 0.586
GAL3ST3
galactose-3-O-sulfotransferase 3.
      
 0.559
ENSNVIP00000006585
annotation not available
      
 0.558
TMEM201
Transmembrane protein 201.
      
 0.557
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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