STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTLDenticleless E3 ubiquitin protein ligase homolog. (730 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.998
RBX1
Ring-box 1.
    
 0.995
ENSNVIP00000024373
Proliferating cell nuclear antigen.
   
 0.992
CDT1
Chromatin licensing and DNA replication factor 1.
   
 
 0.991
CUL4A
Cullin 4A.
    
 0.974
CUL4B
Cullin 4B.
    
 0.974
DDA1
DET1 and DDB1 associated 1.
    
  0.946
ENSNVIP00000026123
Checkpoint kinase 1.
   
 
 0.935
WDHD1
WD repeat and HMG-box DNA binding protein 1.
   
  
 0.934
COPS4
COP9 signalosome subunit 4.
    
  0.923
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.