Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXO47F-box protein 47. (452 aa)    
Predicted Functional Partners:
C1orf109
Chromosome 1 open reading frame 109.
   
    0.744
LMO7
LIM domain 7.
      
 0.670
LIX1
Limb and CNS expressed 1.
   
    0.649
LIX1L
Limb and CNS expressed 1 like.
   
    0.649
CALHM5
Calcium homeostasis modulator family member 5.
   
    0.640
ENSNVIP00000017946
annotation not available
   
    0.640
CALHM2
Calcium homeostasis modulator family member 2.
   
    0.640
SPO11
SPO11 initiator of meiotic double stranded breaks.
   
  
 0.625
ECT2L
Epithelial cell transforming 2 like.
      
 0.615
ENSNVIP00000015662
F-box protein 42.
      
 0.608
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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