Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF185Zinc finger protein 185 with LIM domain. (681 aa)    
Predicted Functional Partners:
TFF3
Trefoil factor 3.
      
 0.753
TLDC2
TBC/LysM-associated domain containing 2.
      
 0.643
UBFD1
Ubiquitin family domain containing 1.
      
 0.639
SLC39A9
Solute carrier family 39 member 9.
      
 0.610
DMAC1
Distal membrane arm assembly complex 1.
      
 0.607
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
      
 0.586
KLHDC4
Kelch domain containing 4.
      
 0.557
DUSP3
Dual specificity phosphatase 3.
      
 0.543
ENSNVIP00000013191
Armadillo repeat containing 7.
      
 0.498
GRIN3B
Glutamate ionotropic receptor NMDA type subunit 3B.
      
 0.488
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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