Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDH9Cadherin 9. (789 aa)    
Predicted Functional Partners:
ENSNVIP00000031759
Catenin beta 1.
    
 0.812
CDH8
Cadherin 8.
   
 
0.799
CTNNA1
Catenin alpha 1.
   
 0.795
CTNNA2
Catenin alpha 2.
   
 0.795
ENSNVIP00000012803
Cadherin 18.
  
0.789
CDH13
Cadherin 13.
     
0.770
ENSNVIP00000012675
annotation not available
  
 
 
0.769
CDH7
Cadherin 7.
   
 
0.767
CTNND1
Catenin delta 1.
   
 0.764
CDH6
Cadherin 6.
  
 
 
0.761
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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