STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALOX12BArachidonate 12-lipoxygenase, 12R type. (699 aa)    
Predicted Functional Partners:
ALOX12
Arachidonate 12-lipoxygenase, 12S type.
     
  0.882
PLA2G4A
Phospholipase A2 group IVA.
    
 0.866
PTGS2
Prostaglandin-endoperoxide synthase 2.
   
 
 0.861
PTGS1
Prostaglandin-endoperoxide synthase 1.
   
 
 0.859
PLA2G4F
Phospholipase A2 group IVF.
    
 0.859
ENSNVIP00000023708
Phospholipase A2 group IVE.
    
 0.857
PLA2G4D
Phospholipase A2 group IVD.
    
 0.857
ENSNVIP00000029179
Arachidonate 5-lipoxygenase activating protein.
   
 0.857
ENSNVIP00000023501
annotation not available
    
 0.856
PLA2G3
Phospholipase A2 group III.
    
 0.838
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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