Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (355 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.967
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
  0.963
ENSNVIP00000018263
annotation not available
   
 0.963
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
0.960
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.952
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.914
PAIP1
poly(A) binding protein interacting protein 1.
   
 0.877
ENSNVIP00000026255
annotation not available
   
 0.874
ENSNVIP00000029430
annotation not available
   
 0.874
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.865
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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