SOD1 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

SOD1

Superoxide dismutase 1. (153 aa)

Predicted Functional Partners:

ENSNVIP00000012825

0.986

ENSNVIP00000017796

0.968

CAT

0.953

BCL2

0.936

HSPA5

0.935

PPARGC1A

0.924

ENSNVIP00000025295

0.915

DERL1

0.899

PSMB6

0.896

ENSNVIP00000023305

0.894

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCL2	ENSNVIP00000012825	ENSNVIP00000017383	ENSNVIP00000012825	BCL2 apoptosis regulator.	annotation not available	0.563
BCL2	HSPA5	ENSNVIP00000017383	ENSNVIP00000007569	BCL2 apoptosis regulator.	Heat shock protein family A (Hsp70) member 5.	0.540
BCL2	PPARGC1A	ENSNVIP00000017383	ENSNVIP00000016625	BCL2 apoptosis regulator.	PPARG coactivator 1 alpha.	0.416
BCL2	SOD1	ENSNVIP00000017383	ENSNVIP00000006040	BCL2 apoptosis regulator.	Superoxide dismutase 1.	0.936
CAT	ENSNVIP00000012825	ENSNVIP00000014719	ENSNVIP00000012825	Catalase.	annotation not available	0.943
CAT	SOD1	ENSNVIP00000014719	ENSNVIP00000006040	Catalase.	Superoxide dismutase 1.	0.953
DERL1	HSPA5	ENSNVIP00000007303	ENSNVIP00000007569	Derlin 1.	Heat shock protein family A (Hsp70) member 5.	0.913
DERL1	SOD1	ENSNVIP00000007303	ENSNVIP00000006040	Derlin 1.	Superoxide dismutase 1.	0.899
ENSNVIP00000012825	BCL2	ENSNVIP00000012825	ENSNVIP00000017383	annotation not available	BCL2 apoptosis regulator.	0.563
ENSNVIP00000012825	CAT	ENSNVIP00000012825	ENSNVIP00000014719	annotation not available	Catalase.	0.943
ENSNVIP00000012825	ENSNVIP00000017796	ENSNVIP00000012825	ENSNVIP00000017796	annotation not available	Copper chaperone for superoxide dismutase.	0.895
ENSNVIP00000012825	HSPA5	ENSNVIP00000012825	ENSNVIP00000007569	annotation not available	Heat shock protein family A (Hsp70) member 5.	0.484
ENSNVIP00000012825	PPARGC1A	ENSNVIP00000012825	ENSNVIP00000016625	annotation not available	PPARG coactivator 1 alpha.	0.938
ENSNVIP00000012825	SOD1	ENSNVIP00000012825	ENSNVIP00000006040	annotation not available	Superoxide dismutase 1.	0.986
ENSNVIP00000017796	ENSNVIP00000012825	ENSNVIP00000017796	ENSNVIP00000012825	Copper chaperone for superoxide dismutase.	annotation not available	0.895
ENSNVIP00000017796	SOD1	ENSNVIP00000017796	ENSNVIP00000006040	Copper chaperone for superoxide dismutase.	Superoxide dismutase 1.	0.968
ENSNVIP00000023305	SOD1	ENSNVIP00000023305	ENSNVIP00000006040	annotation not available	Superoxide dismutase 1.	0.894
ENSNVIP00000025295	SOD1	ENSNVIP00000025295	ENSNVIP00000006040	annotation not available	Superoxide dismutase 1.	0.915
HSPA5	BCL2	ENSNVIP00000007569	ENSNVIP00000017383	Heat shock protein family A (Hsp70) member 5.	BCL2 apoptosis regulator.	0.540
HSPA5	DERL1	ENSNVIP00000007569	ENSNVIP00000007303	Heat shock protein family A (Hsp70) member 5.	Derlin 1.	0.913