Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDZD8PDZ domain containing 8. (1113 aa)    
Predicted Functional Partners:
GNG7
G protein subunit gamma 7.
     
  0.774
GNG13
G protein subunit gamma 13.
     
  0.761
ENSNVIP00000000008
annotation not available
    
 
 0.722
GRK3
G protein-coupled receptor kinase 3.
     
  0.722
ENSNVIP00000017255
annotation not available
     
  0.722
ENSNVIP00000023565
annotation not available
    
 
 0.722
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
     
  0.632
GNAL
G protein subunit alpha L.
     
  0.632
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
     
  0.632
GNAS
GNAS complex locus.
     
  0.632
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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