Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HLA-DPA1Major histocompatibility complex, class II, DP alpha 1. (249 aa)    
Predicted Functional Partners:
ENSNVIP00000005887
annotation not available
   
0.929
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
 
0.929
CD74
CD74 molecule.
   
 0.881
ENSNVIP00000000233
annotation not available
   
 0.822
ENSNVIP00000012748
annotation not available
   
 0.822
ENSNVIP00000007902
annotation not available
  
 
 
0.710
ENSNVIP00000022194
annotation not available
  
 
 
0.709
ENSNVIP00000006647
annotation not available
  
 
0.702
ENSNVIP00000025566
annotation not available
    
  0.685
HLA-DOB
Major histocompatibility complex, class II, DO beta.
   
 
0.674
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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