STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000006099annotation not available (1335 aa)    
Predicted Functional Partners:
WASHC5
WASH complex subunit 5.
   
 0.968
WASHC3
WASH complex subunit 3.
    
 0.968
WASHC1
WASH complex subunit 1.
    
 0.967
WASHC4
WASH complex subunit 4.
   
 0.963
SNX27
Sorting nexin 27.
    
 0.936
CAPZB
Capping actin protein of muscle Z-line subunit beta.
    
 0.905
VPS35
VPS35 retromer complex component.
    
 
 0.905
CAPZA1
Capping actin protein of muscle Z-line subunit alpha 1.
    
 0.890
ENSNVIP00000009707
annotation not available
    
 
 0.881
VPS29
VPS29 retromer complex component.
    
 
 0.881
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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