Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RASGEF1BRasGEF domain family member 1B. (473 aa)    
Predicted Functional Partners:
UNC5D
Unc-5 netrin receptor D.
      
 0.665
PRKG2
Protein kinase cGMP-dependent 2.
      
 0.661
HAUS8
HAUS augmin like complex subunit 8.
      
 0.649
SLC26A3
Solute carrier family 26 member 3.
   
  
 0.640
ENSNVIP00000002095
annotation not available
      
 0.609
LINGO1
Leucine rich repeat and Ig domain containing 1.
   
  
 0.588
SOS1
SOS Ras/Rac guanine nucleotide exchange factor 1.
   
 0.548
ENSNVIP00000009663
annotation not available
      
 0.546
ARHGAP5
Rho GTPase activating protein 5.
      
 0.534
CUX2
Cut like homeobox 2.
   
  
 0.531
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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