STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRAT1BRCA1 associated ATM activator 1. (823 aa)    
Predicted Functional Partners:
BRCA1
BRCA1 DNA repair associated.
    
 
 0.850
ENSNVIP00000007988
Integrator complex subunit 9.
    
 
 0.843
ENSNVIP00000008513
Integrator complex subunit 11.
    
 
 0.830
WDR73
WD repeat domain 73.
    
 
 0.678
INTS4
Integrator complex subunit 4.
    
   0.640
TMEM247
Transmembrane protein 247.
      
 0.606
TTC7A
Tetratricopeptide repeat domain 7A.
      
 0.564
TONSL
Tonsoku like, DNA repair protein.
      
 0.549
CDK12
Cyclin dependent kinase 12.
      
 0.540
BRAP
BRCA1 associated protein.
      
 0.537
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.