STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRAT1BRCA1 associated ATM activator 1. (823 aa)    
Predicted Functional Partners:
BRCA1
BRCA1 DNA repair associated.
    
 
 0.710
E4F1
E4F transcription factor 1.
   
    0.682
TONSL
Tonsoku like, DNA repair protein.
      
 0.656
CDK12
Cyclin dependent kinase 12.
      
 0.540
CDKN2D
Cyclin dependent kinase inhibitor 2D.
      
 0.540
DSCC1
DNA replication and sister chromatid cohesion 1.
      
 0.528
TP53BP1
Tumor protein p53 binding protein 1.
      
 0.519
INCA1
Inhibitor of CDK, cyclin A1 interacting protein 1.
      
 0.510
ENSNVIP00000014101
DNA polymerase alpha 1, catalytic subunit.
   
  
 0.507
CYTL1
Cytokine like 1.
      
 0.485
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.