STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRMT6Protein arginine methyltransferase 6. (375 aa)    
Predicted Functional Partners:
PRMT5
Protein arginine methyltransferase 5.
   
 0.870
NTMT1
N-terminal Xaa-Pro-Lys N-methyltransferase 1.
   
 
 0.835
FBL
Fibrillarin.
   
 
 0.793
TSR2
TSR2 ribosome maturation factor.
   
 
 0.769
UBP1
Upstream binding protein 1.
    
   0.737
RRP12
Ribosomal RNA processing 12 homolog.
   
 
 0.722
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
   0.715
GTPBP4
GTP binding protein 4.
   
    0.700
WDR3
WD repeat domain 3.
   
   0.696
PRMT1
Protein arginine methyltransferase 1.
   
 0.684
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.