Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP47Ubiquitin specific peptidase 47. (1362 aa)    
Predicted Functional Partners:
ENSNVIP00000011079
DNA polymerase beta.
    
 0.952
FBXW11
F-box and WD repeat domain containing 11.
    
 
 0.943
ENSNVIP00000023892
annotation not available
    
 
 0.864
ENSNVIP00000024461
annotation not available
    
 
 0.864
ZRANB1
Zinc finger RANBP2-type containing 1.
   
 
 0.741
ENSNVIP00000000269
Adaptor related protein complex 4 subunit mu 1.
    
   0.735
ENSNVIP00000008604
annotation not available
    
 
 0.729
EFL1
Elongation factor like GTPase 1.
   
 
  0.705
ENSNVIP00000013359
TNF receptor associated factor 6.
    
 
 0.686
AGO2
Argonaute RISC catalytic component 2.
   
   0.647
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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