Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCAF4SR-related CTD associated factor 4. (1140 aa)    
Predicted Functional Partners:
SCAF8
SR-related CTD associated factor 8.
   
  
 0.904
SETX
Senataxin.
   
 
 0.830
ENSNVIP00000004186
annotation not available
   
 
 0.828
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
   
 
 0.794
EXOSC10
Exosome component 10.
   
 
 0.784
PCF11
PCF11 cleavage and polyadenylation factor subunit.
   
 
 0.782
RPRD2
Regulation of nuclear pre-mRNA domain containing 2.
   
 
 0.779
XRN2
5'-3' exoribonuclease 2.
   
 
 0.755
DROSHA
Drosha ribonuclease III.
   
 
 0.738
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.727
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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