GNA12 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GNA12

G protein subunit alpha 12. (383 aa)

Predicted Functional Partners:

ENSNVIP00000010362

0.997

GNA13

0.997

ARHGEF12

0.992

ARHGEF1

0.975

ARHGEF11

0.973

ADRA1A

0.950

ENSNVIP00000023241

0.941

F2R

0.935

ENSNVIP00000012250

0.935

GNGT1

0.935

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADRA1A	ARHGEF1	ENSNVIP00000010032	ENSNVIP00000032013	Adrenoceptor alpha 1A.	Rho guanine nucleotide exchange factor 1.	0.469
ADRA1A	ARHGEF12	ENSNVIP00000010032	ENSNVIP00000002293	Adrenoceptor alpha 1A.	Rho guanine nucleotide exchange factor 12.	0.602
ADRA1A	ENSNVIP00000010362	ENSNVIP00000010032	ENSNVIP00000010362	Adrenoceptor alpha 1A.	annotation not available	0.909
ADRA1A	ENSNVIP00000012250	ENSNVIP00000010032	ENSNVIP00000012250	Adrenoceptor alpha 1A.	annotation not available	0.832
ADRA1A	ENSNVIP00000023241	ENSNVIP00000010032	ENSNVIP00000023241	Adrenoceptor alpha 1A.	G protein subunit gamma 11.	0.891
ADRA1A	GNA12	ENSNVIP00000010032	ENSNVIP00000006196	Adrenoceptor alpha 1A.	G protein subunit alpha 12.	0.950
ADRA1A	GNA13	ENSNVIP00000010032	ENSNVIP00000010375	Adrenoceptor alpha 1A.	G protein subunit alpha 13.	0.909
ADRA1A	GNGT1	ENSNVIP00000010032	ENSNVIP00000023235	Adrenoceptor alpha 1A.	G protein subunit gamma transducin 1.	0.891
ARHGEF1	ADRA1A	ENSNVIP00000032013	ENSNVIP00000010032	Rho guanine nucleotide exchange factor 1.	Adrenoceptor alpha 1A.	0.469
ARHGEF1	ARHGEF11	ENSNVIP00000032013	ENSNVIP00000027777	Rho guanine nucleotide exchange factor 1.	Rho guanine nucleotide exchange factor 11.	0.905
ARHGEF1	ARHGEF12	ENSNVIP00000032013	ENSNVIP00000002293	Rho guanine nucleotide exchange factor 1.	Rho guanine nucleotide exchange factor 12.	0.882
ARHGEF1	ENSNVIP00000010362	ENSNVIP00000032013	ENSNVIP00000010362	Rho guanine nucleotide exchange factor 1.	annotation not available	0.974
ARHGEF1	GNA12	ENSNVIP00000032013	ENSNVIP00000006196	Rho guanine nucleotide exchange factor 1.	G protein subunit alpha 12.	0.975
ARHGEF1	GNA13	ENSNVIP00000032013	ENSNVIP00000010375	Rho guanine nucleotide exchange factor 1.	G protein subunit alpha 13.	0.974
ARHGEF11	ARHGEF1	ENSNVIP00000027777	ENSNVIP00000032013	Rho guanine nucleotide exchange factor 11.	Rho guanine nucleotide exchange factor 1.	0.905
ARHGEF11	ARHGEF12	ENSNVIP00000027777	ENSNVIP00000002293	Rho guanine nucleotide exchange factor 11.	Rho guanine nucleotide exchange factor 12.	0.897
ARHGEF11	ENSNVIP00000010362	ENSNVIP00000027777	ENSNVIP00000010362	Rho guanine nucleotide exchange factor 11.	annotation not available	0.973
ARHGEF11	GNA12	ENSNVIP00000027777	ENSNVIP00000006196	Rho guanine nucleotide exchange factor 11.	G protein subunit alpha 12.	0.973
ARHGEF11	GNA13	ENSNVIP00000027777	ENSNVIP00000010375	Rho guanine nucleotide exchange factor 11.	G protein subunit alpha 13.	0.973
ARHGEF12	ADRA1A	ENSNVIP00000002293	ENSNVIP00000010032	Rho guanine nucleotide exchange factor 12.	Adrenoceptor alpha 1A.	0.602