Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RAB18RAB18, member RAS oncogene family. (206 aa)    
Predicted Functional Partners:
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
    
 0.868
GDI2
GDP dissociation inhibitor 2.
   
 0.847
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
     
 0.847
GDI1
GDP dissociation inhibitor 1.
   
 0.847
TBC1D23
TBC1 domain family member 23.
      
 0.714
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.694
RABGGTB
Rab geranylgeranyltransferase subunit beta.
     
 0.694
VPS37B
VPS37B subunit of ESCRT-I.
   
 
 0.669
CUL3
Cullin 3.
   
   0.647
CHML
CHM like Rab escort protein.
     
 0.640
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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