STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000006262annotation not available (75 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
   
  
 0.858
CASC1
Cancer susceptibility 1.
   
    0.840
ENSNVIP00000008973
annotation not available
   
    0.840
LRRC34
Leucine rich repeat containing 34.
   
    0.840
SLC44A4
Solute carrier family 44 member 4.
   
    0.840
TMEM33
Transmembrane protein 33.
      
 0.742
ENSNVIP00000007258
Solute carrier family 30 member 9.
      
 0.718
SHISA3
Shisa family member 3.
      
 0.691
ENSNVIP00000021044
acyl-CoA oxidase like.
      
 0.656
ATP8A1
ATPase phospholipid transporting 8A1.
      
 0.621
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.