Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STOX2Storkhead box 2. (869 aa)    
Predicted Functional Partners:
TRAPPC11
Trafficking protein particle complex 11.
      
 0.607
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.607
NEPRO
Nucleolus and neural progenitor protein.
      
 0.598
TMEM145
Transmembrane protein 145.
      
 0.596
ARHGAP42
Rho GTPase activating protein 42.
   
  
 0.594
RETSAT
Retinol saturase.
      
 0.590
FAM110B
Family with sequence similarity 110 member B.
    
   0.574
OR1P1
Olfactory receptor family 1 subfamily P member 1 (gene/pseudogene).
      
 0.563
PRSS56
Serine protease 56.
      
 0.557
ATP6V1E2
ATPase H+ transporting V1 subunit E2.
      
 0.548
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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