Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX11DEAD/H-box helicase 11. (906 aa)    
Predicted Functional Partners:
NIPBL
NIPBL cohesin loading factor.
   
 
 0.825
CHTF18
Chromosome transmission fidelity factor 18.
   
 
 0.817
ENSNVIP00000024373
Proliferating cell nuclear antigen.
    
 0.807
ATAD5
ATPase family AAA domain containing 5.
   
 0.801
CHTF8
Chromosome transmission fidelity factor 8.
   
 
 0.787
RAD21
RAD21 cohesin complex component.
   
 
 0.779
ENSNVIP00000016465
Mitotic arrest deficient 2 like 1.
   
 
 0.777
ESCO2
Establishment of sister chromatid cohesion N-acetyltransferase 2.
   
 
 0.768
DSCC1
DNA replication and sister chromatid cohesion 1.
   
 
 0.761
SMC1A
Structural maintenance of chromosomes 1A.
  
 
 0.755
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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