Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D. (268 aa)    
Predicted Functional Partners:
TAF1C
TATA-box binding protein associated factor, RNA polymerase I subunit C.
    
 0.998
TAF1A
TATA-box binding protein associated factor, RNA polymerase I subunit A.
    
 0.997
TBP
TATA-box binding protein.
    
 0.975
TBPL2
TATA-box binding protein like 2.
    
 0.947
ENSNVIP00000011808
annotation not available
    
 0.870
HINT2
Histidine triad nucleotide binding protein 2.
    
 0.870
HINT1
Histidine triad nucleotide binding protein 1.
    
 0.870
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.869
UBTF
Upstream binding transcription factor.
    
 0.854
UBN2
Ubinuclein 2.
    
 0.852
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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