GPR6 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Experiments

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[Homology]

Score

GPR6

G protein-coupled receptor 6. (362 aa)

Predicted Functional Partners:

GPR55

0.625

TAC1

0.608

ENSNVIP00000005538

0.563

GNB4

0.563

GNB2

0.560

ENSNVIP00000020543

0.560

PENK

0.528

PDYN

0.524

TMEM171

0.503

LRRC61

0.501

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNVIP00000005538	GNB2	ENSNVIP00000005538	ENSNVIP00000001625	annotation not available	G protein subunit beta 2.	0.635
ENSNVIP00000005538	GPR55	ENSNVIP00000005538	ENSNVIP00000003285	annotation not available	G protein-coupled receptor 55.	0.480
ENSNVIP00000005538	GPR6	ENSNVIP00000005538	ENSNVIP00000006499	annotation not available	G protein-coupled receptor 6.	0.563
ENSNVIP00000005538	PDYN	ENSNVIP00000005538	ENSNVIP00000026505	annotation not available	Prodynorphin.	0.404
ENSNVIP00000020543	GPR6	ENSNVIP00000020543	ENSNVIP00000006499	annotation not available	G protein-coupled receptor 6.	0.560
ENSNVIP00000020543	TMEM171	ENSNVIP00000020543	ENSNVIP00000018691	annotation not available	Transmembrane protein 171.	0.740
GNB2	ENSNVIP00000005538	ENSNVIP00000001625	ENSNVIP00000005538	G protein subunit beta 2.	annotation not available	0.635
GNB2	GNB4	ENSNVIP00000001625	ENSNVIP00000023030	G protein subunit beta 2.	G protein subunit beta 4.	0.759
GNB2	GPR55	ENSNVIP00000001625	ENSNVIP00000003285	G protein subunit beta 2.	G protein-coupled receptor 55.	0.480
GNB2	GPR6	ENSNVIP00000001625	ENSNVIP00000006499	G protein subunit beta 2.	G protein-coupled receptor 6.	0.560
GNB2	PDYN	ENSNVIP00000001625	ENSNVIP00000026505	G protein subunit beta 2.	Prodynorphin.	0.404
GNB4	GNB2	ENSNVIP00000023030	ENSNVIP00000001625	G protein subunit beta 4.	G protein subunit beta 2.	0.759
GNB4	GPR55	ENSNVIP00000023030	ENSNVIP00000003285	G protein subunit beta 4.	G protein-coupled receptor 55.	0.480
GNB4	GPR6	ENSNVIP00000023030	ENSNVIP00000006499	G protein subunit beta 4.	G protein-coupled receptor 6.	0.563
GNB4	PDYN	ENSNVIP00000023030	ENSNVIP00000026505	G protein subunit beta 4.	Prodynorphin.	0.404
GPR55	ENSNVIP00000005538	ENSNVIP00000003285	ENSNVIP00000005538	G protein-coupled receptor 55.	annotation not available	0.480
GPR55	GNB2	ENSNVIP00000003285	ENSNVIP00000001625	G protein-coupled receptor 55.	G protein subunit beta 2.	0.480
GPR55	GNB4	ENSNVIP00000003285	ENSNVIP00000023030	G protein-coupled receptor 55.	G protein subunit beta 4.	0.480
GPR55	GPR6	ENSNVIP00000003285	ENSNVIP00000006499	G protein-coupled receptor 55.	G protein-coupled receptor 6.	0.625
GPR6	ENSNVIP00000005538	ENSNVIP00000006499	ENSNVIP00000005538	G protein-coupled receptor 6.	annotation not available	0.563