Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000006517SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1. (959 aa)    
Predicted Functional Partners:
PRIMPOL
Primase and DNA directed polymerase.
    
 
 0.976
ENSNVIP00000025797
Replication protein A3.
    
 0.972
ENSNVIP00000014150
Replication protein A1.
    
 0.965
ENSNVIP00000004005
Ring finger and WD repeat domain 3.
    
 
 0.880
RPA2
Replication protein A2.
   
 0.867
ENSNVIP00000024373
Proliferating cell nuclear antigen.
   
 0.853
CLSPN
Claspin.
   
 
 0.830
RPL15
Ribosomal protein L15.
   
 
 0.816
RPL35
Ribosomal protein L35.
   
 
 0.811
ENSNVIP00000018508
annotation not available
   
 
 0.811
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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