STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQSEC3IQ motif and Sec7 domain ArfGEF 3. (1185 aa)    
Predicted Functional Partners:
ARF6
ADP ribosylation factor 6.
   
 
 0.768
TMEM236
Transmembrane protein 236.
      
 0.684
INSYN1
Inhibitory synaptic factor 1.
      
 0.680
RBM43
RNA binding motif protein 43.
      
 0.638
CALN1
Calneuron 1.
    
 
 0.612
RBFOX3
RNA binding fox-1 homolog 3.
   
 
 0.586
ZNF76
Zinc finger protein 76.
      
 0.569
RBMS3
RNA binding motif single stranded interacting protein 3.
      
 0.555
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
     
 0.541
MYCBP2
MYC binding protein 2.
      
 0.514
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.