STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf54Chromosome 11 open reading frame 54. (315 aa)    
Predicted Functional Partners:
CEP295
Centrosomal protein 295.
      
 0.732
TBC1D22B
TBC1 domain family member 22B.
      
 0.620
CCDC82
Coiled-coil domain containing 82.
      
 0.613
ENSNVIP00000006613
annotation not available
 
    
 0.594
HEPHL1
Hephaestin like 1.
      
 0.571
NARS1
asparaginyl-tRNA synthetase 1.
      
 0.519
PDE4DIP
Phosphodiesterase 4D interacting protein.
      
 0.512
HDLBP
High density lipoprotein binding protein.
      
 0.510
ENSNVIP00000025188
Lipase H.
      
 0.508
SGO2
Shugoshin 2.
      
 0.506
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.