Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATG2BAutophagy related 2B. (2077 aa)    
Predicted Functional Partners:
WDR45
WD repeat domain 45.
    
 0.986
WDR45B
WD repeat domain 45B.
    
 0.985
WIPI2
WD repeat domain, phosphoinositide interacting 2.
    
 0.982
ENSNVIP00000022816
annotation not available
   
 0.974
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.972
WIPI1
WD repeat domain, phosphoinositide interacting 1.
    
 0.970
ENSNVIP00000029546
annotation not available
   
 0.949
ATG2A
Autophagy related 2A.
    
  0.888
TRAPPC11
Trafficking protein particle complex 11.
   
 
 0.797
TRAPPC8
Trafficking protein particle complex 8.
   
 
 0.735
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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