STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF145Ring finger protein 145. (672 aa)    
Predicted Functional Partners:
MARCHF6
Membrane associated ring-CH-type finger 6.
    
 
 0.785
HMGCR
3-hydroxy-3-methylglutaryl-CoA reductase.
   
 
 0.752
NPEPL1
Aminopeptidase like 1.
      
 0.750
OS9
OS9 endoplasmic reticulum lectin.
   
 0.709
ERLEC1
Endoplasmic reticulum lectin 1.
   
 0.709
DERL1
Derlin 1.
    
 0.707
DERL2
Derlin 2.
    
 0.682
DERL3
Derlin 3.
    
 0.682
UBXN1
UBX domain protein 1.
    
 0.654
SPATA5
Spermatogenesis associated 5.
    
 0.640
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.