STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC6Tetratricopeptide repeat domain 6. (600 aa)    
Predicted Functional Partners:
HCFC2
Host cell factor C2.
   
 0.851
HCFC1
Host cell factor C1.
   
 0.851
MCRS1
Microspherule protein 1.
    
 0.799
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.768
BAP1
BRCA1 associated protein 1.
    
 0.712
UCHL5
Ubiquitin C-terminal hydrolase L5.
    
 0.712
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.656
ENSNVIP00000024175
Testis expressed 30.
    
 0.656
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 
 0.647
LIAS
Lipoic acid synthetase.
      
 0.639
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.