FOXA1 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

FOXA1

Forkhead box A1. (472 aa)

Predicted Functional Partners:

GATA3

0.986

ESR1

0.954

AR

0.946

EP300

0.829

ENSNVIP00000027687

0.821

GATA6

0.795

NKX2-1

0.781

GATA4

0.781

GATA2

0.755

PGR

0.743

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AR	EP300	ENSNVIP00000021933	ENSNVIP00000000696	Androgen receptor.	E1A binding protein p300.	0.956
AR	ESR1	ENSNVIP00000021933	ENSNVIP00000008865	Androgen receptor.	Estrogen receptor 1.	0.644
AR	FOXA1	ENSNVIP00000021933	ENSNVIP00000006611	Androgen receptor.	Forkhead box A1.	0.946
AR	PGR	ENSNVIP00000021933	ENSNVIP00000031699	Androgen receptor.	Progesterone receptor.	0.854
ENSNVIP00000027687	EP300	ENSNVIP00000027687	ENSNVIP00000000696	Nuclear receptor interacting protein 1.	E1A binding protein p300.	0.859
ENSNVIP00000027687	ESR1	ENSNVIP00000027687	ENSNVIP00000008865	Nuclear receptor interacting protein 1.	Estrogen receptor 1.	0.975
ENSNVIP00000027687	FOXA1	ENSNVIP00000027687	ENSNVIP00000006611	Nuclear receptor interacting protein 1.	Forkhead box A1.	0.821
ENSNVIP00000027687	GATA2	ENSNVIP00000027687	ENSNVIP00000023463	Nuclear receptor interacting protein 1.	GATA binding protein 2.	0.739
ENSNVIP00000027687	GATA3	ENSNVIP00000027687	ENSNVIP00000019293	Nuclear receptor interacting protein 1.	GATA binding protein 3.	0.888
ENSNVIP00000027687	PGR	ENSNVIP00000027687	ENSNVIP00000031699	Nuclear receptor interacting protein 1.	Progesterone receptor.	0.737
EP300	AR	ENSNVIP00000000696	ENSNVIP00000021933	E1A binding protein p300.	Androgen receptor.	0.956
EP300	ENSNVIP00000027687	ENSNVIP00000000696	ENSNVIP00000027687	E1A binding protein p300.	Nuclear receptor interacting protein 1.	0.859
EP300	ESR1	ENSNVIP00000000696	ENSNVIP00000008865	E1A binding protein p300.	Estrogen receptor 1.	0.987
EP300	FOXA1	ENSNVIP00000000696	ENSNVIP00000006611	E1A binding protein p300.	Forkhead box A1.	0.829
EP300	GATA2	ENSNVIP00000000696	ENSNVIP00000023463	E1A binding protein p300.	GATA binding protein 2.	0.784
EP300	GATA3	ENSNVIP00000000696	ENSNVIP00000019293	E1A binding protein p300.	GATA binding protein 3.	0.940
EP300	GATA4	ENSNVIP00000000696	ENSNVIP00000027744	E1A binding protein p300.	GATA binding protein 4.	0.806
EP300	GATA6	ENSNVIP00000000696	ENSNVIP00000022917	E1A binding protein p300.	GATA binding protein 6.	0.576
EP300	PGR	ENSNVIP00000000696	ENSNVIP00000031699	E1A binding protein p300.	Progesterone receptor.	0.749
ESR1	AR	ENSNVIP00000008865	ENSNVIP00000021933	Estrogen receptor 1.	Androgen receptor.	0.644