Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDK1Sidekick cell adhesion molecule 1. (2164 aa)    
Predicted Functional Partners:
ZSCAN25
Zinc finger and SCAN domain containing 25.
     
 0.639
HINFP
Histone H4 transcription factor.
      
 0.610
DKKL1
Dickkopf like acrosomal protein 1.
   
 
 0.574
SLC35F1
Solute carrier family 35 member F1.
      
 0.552
CORO2A
Coronin 2A.
   
  
 0.545
CORO2B
Coronin 2B.
   
  
 0.545
BICC1
BicC family RNA binding protein 1.
      
 0.539
APOLD1
Apolipoprotein L domain containing 1.
    
 0.491
DENND6B
DENN domain containing 6B.
      
 0.488
RNF181
Ring finger protein 181.
      
 0.488
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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