Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF25TNF receptor superfamily member 25. (418 aa)    
Predicted Functional Partners:
TNFSF15
TNF superfamily member 15.
    
 0.994
ENSNVIP00000013503
TNFRSF1A associated via death domain.
    
 0.964
ENSNVIP00000021095
Tumor necrosis factor.
    
 0.900
FADD
Fas associated via death domain.
   
 0.891
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.834
LTA
Lymphotoxin alpha.
    
 0.775
ENSNVIP00000007208
Rho family GTPase 3.
    
 0.758
TOR1A
Torsin family 1 member A.
      
 0.738
TNFAIP3
TNF alpha induced protein 3.
    
 0.729
ENSNVIP00000000469
annotation not available
    
 0.717
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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