Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1482 aa)    
Predicted Functional Partners:
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 0.992
XPA
XPA, DNA damage recognition and repair factor.
    
 0.969
POLR2I
RNA polymerase II subunit I.
    
 0.968
ENSNVIP00000004186
annotation not available
    
 0.960
POLR2B
RNA polymerase II subunit B.
    
 0.950
DDB1
Damage specific DNA binding protein 1.
    
 0.944
ENSNVIP00000026782
RNA polymerase II subunit G.
    
 0.937
ENSNVIP00000019589
RNA polymerase II subunit C.
    
 0.935
POLR2K
RNA polymerase II subunit K.
    
  0.926
ENSNVIP00000003819
annotation not available
    
  0.921
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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