ADRA1B protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ADRA1B

Adrenoceptor alpha 1B. (518 aa)

Predicted Functional Partners:

ADRA1A

0.958

GNA12

0.910

GNGT1

0.904

GNG4

0.903

ENSNVIP00000023241

0.902

GNB2

0.899

GNB3

0.899

ADRA1D

0.893

GNA14

0.887

GNG13

0.887

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADRA1A	ADRA1B	ENSNVIP00000010032	ENSNVIP00000006632	Adrenoceptor alpha 1A.	Adrenoceptor alpha 1B.	0.958
ADRA1A	ADRA1D	ENSNVIP00000010032	ENSNVIP00000024594	Adrenoceptor alpha 1A.	Adrenoceptor alpha 1D.	0.931
ADRA1A	ENSNVIP00000023241	ENSNVIP00000010032	ENSNVIP00000023241	Adrenoceptor alpha 1A.	G protein subunit gamma 11.	0.891
ADRA1A	GNA12	ENSNVIP00000010032	ENSNVIP00000006196	Adrenoceptor alpha 1A.	G protein subunit alpha 12.	0.950
ADRA1A	GNA14	ENSNVIP00000010032	ENSNVIP00000017788	Adrenoceptor alpha 1A.	G protein subunit alpha 14.	0.866
ADRA1A	GNB2	ENSNVIP00000010032	ENSNVIP00000001625	Adrenoceptor alpha 1A.	G protein subunit beta 2.	0.899
ADRA1A	GNB3	ENSNVIP00000010032	ENSNVIP00000031991	Adrenoceptor alpha 1A.	G protein subunit beta 3.	0.902
ADRA1A	GNG13	ENSNVIP00000010032	ENSNVIP00000020774	Adrenoceptor alpha 1A.	G protein subunit gamma 13.	0.887
ADRA1A	GNG4	ENSNVIP00000010032	ENSNVIP00000008906	Adrenoceptor alpha 1A.	G protein subunit gamma 4.	0.904
ADRA1A	GNGT1	ENSNVIP00000010032	ENSNVIP00000023235	Adrenoceptor alpha 1A.	G protein subunit gamma transducin 1.	0.891
ADRA1B	ADRA1A	ENSNVIP00000006632	ENSNVIP00000010032	Adrenoceptor alpha 1B.	Adrenoceptor alpha 1A.	0.958
ADRA1B	ADRA1D	ENSNVIP00000006632	ENSNVIP00000024594	Adrenoceptor alpha 1B.	Adrenoceptor alpha 1D.	0.893
ADRA1B	ENSNVIP00000023241	ENSNVIP00000006632	ENSNVIP00000023241	Adrenoceptor alpha 1B.	G protein subunit gamma 11.	0.902
ADRA1B	GNA12	ENSNVIP00000006632	ENSNVIP00000006196	Adrenoceptor alpha 1B.	G protein subunit alpha 12.	0.910
ADRA1B	GNA14	ENSNVIP00000006632	ENSNVIP00000017788	Adrenoceptor alpha 1B.	G protein subunit alpha 14.	0.887
ADRA1B	GNB2	ENSNVIP00000006632	ENSNVIP00000001625	Adrenoceptor alpha 1B.	G protein subunit beta 2.	0.899
ADRA1B	GNB3	ENSNVIP00000006632	ENSNVIP00000031991	Adrenoceptor alpha 1B.	G protein subunit beta 3.	0.899
ADRA1B	GNG13	ENSNVIP00000006632	ENSNVIP00000020774	Adrenoceptor alpha 1B.	G protein subunit gamma 13.	0.887
ADRA1B	GNG4	ENSNVIP00000006632	ENSNVIP00000008906	Adrenoceptor alpha 1B.	G protein subunit gamma 4.	0.903
ADRA1B	GNGT1	ENSNVIP00000006632	ENSNVIP00000023235	Adrenoceptor alpha 1B.	G protein subunit gamma transducin 1.	0.904