Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGRN | CHRND | ENSNVIP00000009867 | ENSNVIP00000004438 | Agrin. | Cholinergic receptor nicotinic delta subunit. | 0.448 |
AGRN | CHRNE | ENSNVIP00000009867 | ENSNVIP00000025250 | Agrin. | Cholinergic receptor nicotinic epsilon subunit. | 0.430 |
AGRN | COLQ | ENSNVIP00000009867 | ENSNVIP00000022346 | Agrin. | Collagen like tail subunit of asymmetric acetylcholinesterase. | 0.465 |
AGRN | ENSNVIP00000006699 | ENSNVIP00000009867 | ENSNVIP00000006699 | Agrin. | annotation not available | 0.767 |
AGRN | LRP4 | ENSNVIP00000009867 | ENSNVIP00000015257 | Agrin. | LDL receptor related protein 4. | 0.999 |
AGRN | MUSK | ENSNVIP00000009867 | ENSNVIP00000010650 | Agrin. | Muscle associated receptor tyrosine kinase. | 0.931 |
AGRN | RAPSN | ENSNVIP00000009867 | ENSNVIP00000013112 | Agrin. | Receptor associated protein of the synapse. | 0.613 |
CHRNA1 | CHRND | ENSNVIP00000011030 | ENSNVIP00000004438 | Cholinergic receptor nicotinic alpha 1 subunit. | Cholinergic receptor nicotinic delta subunit. | 0.768 |
CHRNA1 | CHRNE | ENSNVIP00000011030 | ENSNVIP00000025250 | Cholinergic receptor nicotinic alpha 1 subunit. | Cholinergic receptor nicotinic epsilon subunit. | 0.785 |
CHRNA1 | CHRNG | ENSNVIP00000011030 | ENSNVIP00000004514 | Cholinergic receptor nicotinic alpha 1 subunit. | Cholinergic receptor nicotinic gamma subunit. | 0.782 |
CHRNA1 | COLQ | ENSNVIP00000011030 | ENSNVIP00000022346 | Cholinergic receptor nicotinic alpha 1 subunit. | Collagen like tail subunit of asymmetric acetylcholinesterase. | 0.454 |
CHRNA1 | ENSNVIP00000006699 | ENSNVIP00000011030 | ENSNVIP00000006699 | Cholinergic receptor nicotinic alpha 1 subunit. | annotation not available | 0.524 |
CHRNA1 | MUSK | ENSNVIP00000011030 | ENSNVIP00000010650 | Cholinergic receptor nicotinic alpha 1 subunit. | Muscle associated receptor tyrosine kinase. | 0.553 |
CHRNA1 | RAPSN | ENSNVIP00000011030 | ENSNVIP00000013112 | Cholinergic receptor nicotinic alpha 1 subunit. | Receptor associated protein of the synapse. | 0.583 |
CHRND | AGRN | ENSNVIP00000004438 | ENSNVIP00000009867 | Cholinergic receptor nicotinic delta subunit. | Agrin. | 0.448 |
CHRND | CHRNA1 | ENSNVIP00000004438 | ENSNVIP00000011030 | Cholinergic receptor nicotinic delta subunit. | Cholinergic receptor nicotinic alpha 1 subunit. | 0.768 |
CHRND | CHRNG | ENSNVIP00000004438 | ENSNVIP00000004514 | Cholinergic receptor nicotinic delta subunit. | Cholinergic receptor nicotinic gamma subunit. | 0.511 |
CHRND | ENSNVIP00000006699 | ENSNVIP00000004438 | ENSNVIP00000006699 | Cholinergic receptor nicotinic delta subunit. | annotation not available | 0.571 |
CHRND | MUSK | ENSNVIP00000004438 | ENSNVIP00000010650 | Cholinergic receptor nicotinic delta subunit. | Muscle associated receptor tyrosine kinase. | 0.535 |
CHRND | RAPSN | ENSNVIP00000004438 | ENSNVIP00000013112 | Cholinergic receptor nicotinic delta subunit. | Receptor associated protein of the synapse. | 0.667 |
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