Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VSTM4V-set and transmembrane domain containing 4. (320 aa)    
Predicted Functional Partners:
ENSNVIP00000010176
Dual specificity phosphatase 19.
    
 
 0.656
CELSR1
Cadherin EGF LAG seven-pass G-type receptor 1.
      
 0.552
LLGL2
LLGL scribble cell polarity complex component 2.
    
 
 0.552
C1QTNF6
C1q and TNF related 6.
      
 0.541
TMEM170B
Transmembrane protein 170B.
      
 0.527
ENSNVIP00000004556
annotation not available
      
 0.479
NME8
NME/NM23 family member 8.
   
 
 0.462
WDR90
WD repeat domain 90.
   
 0.461
NBR1
NBR1 autophagy cargo receptor.
    
 0.457
GPR137C
G protein-coupled receptor 137C.
      
 0.456
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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