Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A13Solute carrier family 6 member 13. (602 aa)    
Predicted Functional Partners:
SLC6A11
Solute carrier family 6 member 11.
     
  0.882
SLC6A1
Solute carrier family 6 member 1.
   
 
  0.757
PPP1R1C
Protein phosphatase 1 regulatory inhibitor subunit 1C.
      
 0.436
BHMT
Betaine--homocysteine S-methyltransferase.
   
  
 0.433
SYN2
Synapsin II.
   
  
 0.427
SLC13A3
Solute carrier family 13 member 3.
   
  
 0.427
ENSNVIP00000008064
annotation not available
      
 0.423
CRTC3
CREB regulated transcription coactivator 3.
      
 0.423
LDLRAD3
Low density lipoprotein receptor class A domain containing 3.
      
 0.422
GNL3L
G protein nucleolar 3 like.
      
 0.419
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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